Good Science - Part II
How Does Urbanization Affect the Watershed?
How Do Dams Affect the Watershed?
How Does Agriculture Affect the Watershed
Modern land use tends to simplify natural systems because of our focus on the individual species (e.g., wheat), process (e.g., hydropower), or type of place (e.g., flat valleys) that has economic value to us. Restoration efforts often use the same strategy, focusing on one variable such as water quality or number of pools, when a larger view of the processes in the watershed would give better long-term results.
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"A common thread in the decline of native fishes...is the degradation and simplification of habitat..."(Bottom, 1997)
Dan Bottom, Fisheries biologist |
In past decades, efforts to improve salmon habitat consisted largely of instream construction, such as riprap, log weirs, gabions, and other artificial structures. Several long-term studies of the effects of these instream structures have found that they often fail, and can even cause greater damage downstream. (Frissel and Nawa, 1992) Tribal staff are moving toward stream restoration methods that more closely mimic nature or simply allow natural processes to do their work. The latter methods are called "passive" restoration. |
Passive restoration means allowing natural processes to return to a stream by stopping activities that cause degradation or prevent recovery.
Improving land management and letting nature do the repair is often more effective than trying to compensate for the damage. Passive restoration includes changing land use in the watershed to prevent soil erosion and increase water infiltration; managing cattle to protect riparian vegetation and streambanks; keeping toxic chemicals out of the water; managing construction, timber harvest, and roadbuilding to prevent sedimentation; and choosing not to build, harvest, or graze in sensitive areas.
(Kauffman et al., 1997)
Most human activities have some effect on watersheds. In the following pages we examine urbanization, dams, agriculture, livestock grazing, timber harvest, and roads, in terms of how they affect watersheds and fish habitat, and what we can do to limit harmful effects and improve watershed health.
How Does Urbanization Affect the Watershed?
The 1998 listing of Lower Columbia steelhead salmon as threatened and Upper Columbia steelhead as endangered brought watershed problems home to the cities in the Columbia Basin. Steelhead, like other anadromous species, need cold, clean water, and sufficient water for migration, spawning, and rearing. They spend one to three years in freshwater before heading to the ocean; they are, therefore, especially vulnerable to the dangers of dewatered, polluted streams.
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Paved surfaces above, cleared slopes below, and heavy rain created a landslide. 22 |
Concentrations of housing, business, industry, and roads-in short, towns and cities, and even rural residential areas-radically alter the capture, storage, and release of water. Local streams are usually confined by channels, pipes, or culverts, or even filled in. Extensive paved surfaces prevent rain from filtering into the soil and send it off into drains and ditches carrying sediments and chemicals from countless human activities. Forested or brushy slopes are cleared for housing, and muddy runoff gets even worse.
Chemical waste products and sewage find their way into the rivers, streams, and groundwater by several routes. Some industrial wastes are legally discharged into the waterways under regulations and permits. Some are illegally or accidentally discharged. Sewage may seep from septic systems or overflow in storms. Runoff carries substances that spill or accumulate on the ground, such as oil and gasoline, into the storm drains and from there into the rivers and streams.
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An urban riparian buffer. 23 |
Some of the chemicals carried in runoff as "nonpoint source pollution" are highly toxic and persistent. Many organochlorine-based chemicals, such as dioxins, furans, PCBs, chlorinated pesticides, and DDT, tend to drop out of the water column and bind to sediments and other organic matter, where they can easily be taken up by aquatic species, including fish. Heavy metals, especially mercury, and radionuclides can also be taken up by the aquatic environment.
Consumption of chemically contaminated fish can cause human health risks. In fact, the USEPA has identified fish consumption as the main route of human exposure to toxic substances. Subsistence fishers and others who frequently eat fish are at greater risk of exposure to aquatic contamination. Human health effects documented for these toxic substances include cancer and reproductive, developmental, and neurological disorders. These substances can also be harmful to fish-eating wildlife and birds.
Most fish consumption advisories in the US concern mercury, PCBs, dioxins, chlordane, and DDT levels in fish. Approximately 30 fish advisories were issued in the states of Washington, Oregon, and Idaho in 1996.
It is often less expensive to prevent further damage than to repair what has been done. Therefore, the first priority for city planners, developers, and residents is to gain an understanding of local watersheds and shape new land uses appropriately. The following recommendations or measures are being taken in the Portland metropolitan area. They have applicability to towns and cities everywhere.
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Monitoring is an important part of reducing and preventing chemical contamination from urban and industrial processes. (See the Good Results section.)
How Do Dams Affect the Watershed?
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Ice Harbor Dam on the Snake River. 25 |
U.S. Army Corps of Engineers workers pump Snake River juvenile salmon from collection facility onto a barge for transportation past eight dams. 26 |
Dam construction and operation alter not only the physical and chemical functions of rivers, but also the communities of aquatic organisms and many aspects of the entire watershed. Dams, from simple earth berms on tributaries to the enormous dams of the mainstem Columbia, have many negative effects on salmon, perhaps more than any other human action. Several of the major Columbia River and Snake River dams were constructed without provision for fish passage. Dams in the Columbia Basin have blocked off more than half of the original salmon habitat. Many tributaries also have dams without fish ladders. Small irrigation dams rebuilt or modified yearly, such as "pushup dams," often block fish passage, too."The dams are by far the biggest 'nets' in the river... The artificial distinction between 'harvest' and those who kill salmon for other economic reasons must cease."
Salmon policy statement of the Confederated Tribes of the Umatilla Indian Reservation |
Dams capture and hold sediment and organic material, blocking the flow of nutrients downstream and causing higher levels of erosion and other changes to the river channel for miles below the dam. Dams alter the temperature regimes of naturally flowing rivers; stream temperatures are higher for a longer period in the summer and lower in the winter. Shifts in temperature regime can change the timing of salmon incubation and spawning, reducing life history diversity. Loss of diversity makes a population more vulnerable to environmental change.
The still water of reservoirs behind large dams slows the downstream migration of juvenile salmon and makes them more vulnerable to predators. Lack of current is disorienting to both juvenile and adult anadromous fish.
Dams used for flood control, irrigation, hydropower, and recreation also alter the natural patterns of high and low water (the hydrograph). Salmon migrations, both upstream and downstream, are closely correlated with flow. Changes in flow can put migrants in the wrong place at the wrong time. For example, juvenile salmon depend on river energy to migrate passively downstream tail first. If they do not reach saltwater at the proper time and size, they may fail to adapt physiologically and may suffer higher mortality from disease or predators. Juvenile salmon are estimated to take more than twice as long to reach the Columbia River estuary since the mainstem dams were constructed.(CBFWA, 1991)
Fluctuations in daily river flows caused by daily changes in power demands can strand juvenile fish in pools near shore, where they die from heat stress, predation, or desiccation. In a recent study of stranding in the Hanford Reach conducted by Washington Department of Fish and Wildlife and Grant County Public Utility District, biologists counted 31,500 dead juvenile salmon in the limited areas they sampled.
(WDFW, 1998)
A percentage of juvenile fish traveling downstream are injured or killed passing through turbines. Others are injured or killed going through bypass facilities. Studies have found that each dam with fish passage on the mainstem Columbia and Snake kills between 5 and 17 percent of the migrants.
(Marmorek et al., 1996)
Snake River salmon are removed from the river at Lower Granite Dam, put into trucks or barges, transported past the next eight dams, and released below Bonneville Dam to continue their journey to the sea. Transportation entails some mortality. It is likely that transportation also interrupts or compromises the physiological changes juvenile fish undergo as they migrate, impairing their ability to fully adapt to salt water. They are more exposed to predators upon release from the barge or truck, when they are unnaturally concentrated in one place.
(ISAB, 1998;) (Petersen and De Angelis, 1992)
Downstream migrants have the best chance of survival by passing over the dams in controlled spill or surface bypass systems. Mortality estimates for passing through spill, turbines, or a screen system were 4 percent, 18 percent, and 20 percent, respectively, in the only comparative study done so far.
(Gilbreath et al., 1993) A potential hazard of spill is the tendency of falling water to capture air, supersaturating the river with dissolved gas. This can cause air bubbles in the fish bloodstream, similar to "the bends" of divers who ascend too quickly. Recent engineering changes to the mainstem dams, including spill deflectors or "flip lips," and others under development, such as raised stilling basins downstream, have reduced this problem.
It is widespread scientific consensus that salmon need natural river conditions to complete their life cycle and survive for generations to come.
(ISG, 1996; NRC, 1996) Operating dams to follow the natural river hydrograph more closely would reestablish some of the ecological functions of the river and would assist salmon migration. Minimizing daily fluctuations in flow during periods of egg incubation, emergence, and early life of salmon fry would improve survival.
Drawing down impoundments would increase the water velocity and improve aspects of water quality such as temperature, turbidity, and organic nutrients. Removing or breaching dams that have filled with sediment or have otherwise outlived their usefulness would restore lost salmon habitat.
Adult passage over dams can be improved by engineering changes based on bioenergetic studies of salmon. Some studies indicate that adult salmon lose less energy from leaping over vertical barriers than from swimming through submerged weirs and baffles.
(Orsborn, 1987) This suggests that if fishways are correctly designed, adult salmon could negotiate high dams such as Grand Coulee and Brownlee, which do not now have fish passage, and reclaim hundreds of miles of former habitat.
Traditional methods of irrigation in which water is allowed to flow freely across a field ("flood" irrigation) or to run down each row from a system of ditches ("furrow" irrigation) are still common in parts of the Columbia Basin. The water is diverted from the stream in a ditch or canal, or by a pipe-and-pump system. In summer, as the water levels in rivers and streams drop, many irrigators find they need a small dam to get the water up to the level of the intake. So every year they use a tractor to push gravel in the stream bed into an earthen berm to hold the water. In the fall, they breach the dam.
These "pushup" dams often block fish passage entirely. When they are breached, the resultant rush of sediment and gravel downstream can destroy spawning beds. Yearly disturbance of the stream channel can create many unintended consequences for banks and substrate.27
Replacing small dams with permanent and more efficient irrigation delivery systems restores fish passage and natural stream functions. It also saves labor and provides the irrigator a more reliable water source. (See Teanaway River example, page 18.)
How Does Agriculture Affect the Watershed?
Agriculture is an important land and water use in the Columbia Basin, and good agricultural management is one of the keys to healthy streams. Cultivation exposes soil to erosion by wind and water, then surface water runoff can carry sediment and agricultural chemicals into the streams. Canals, ditches, and pipes that divert water for irrigation can also divert juvenile fish into the fields. Thus, the environmental challenge for farmers is to find ways to raise crops while slowing or preventing erosion, and to irrigate without harming fish. |
Pushup dams that are constructed yearly for irrigation disturb the stream channel and often block fish passage. 27 |
When the soil is exposed and compacted or heavily eroding, water runs off more rapidly and carries more sediment to the streams. The net result is an altered hydrograph, with higher peak flows and lower low flows. This means bigger floods, less riparian vegetation, and less salmon habitat. Excessive sediment clogs spawning gravels, fills in pools, and alters channel width and mean depth.(Mount, 1995)
Erosion represents a permanent loss of fertile topsoil and nutrients from croplands. In addition, eroding soil carries pesticides and other long-lasting organic compounds into the streams. These compounds are chemically bound to soil particles, but can be released into the food chain.
Agricultural chemicals have a substantial effect on both surface water and groundwater. Recent US Geological Survey (USGS) studies of water quality and fish communities in the central Columbia plateau, for example, found nitrate concentrations exceeding drinking water standards in about 20 percent of the wells sampled.
(USGS, 1998) The highest concentrations were generally in shallow wells in irrigated areas, and were attributed primarily to agricultural fertilizers.
Pesticides were detected in 60 percent of shallow wells and 46 percent of deeper public supply wells, also correlated with irrigated agricultural areas. High levels of pesticides, including DDT, also were detected in fish tissues in the Yakima River Basin, one of the most intensively irrigated areas in the United States.
(USGS, 1997) These levels were high enough to pose a risk to human health from eating fish from the lower Yakima River. The Washington Department of Health issued an advisory warning against eating bottom fish (large-scale sucker, bridgelip sucker, mountain whitefish, carp, channel catfish, and northern pikeminnow) from the lower Yakima River more than once a week because of high levels of DDT found in their tissues.31 
Any farming practice that reduces runoff and soil erosion benefits both land and water. In addition, methods that use fewer synthetic chemicals ("alternative" or sustainable agriculture) result in less damage to the watershed.
Reduce Runoff and Erosion
Water-conserving irrigation methods can make a big difference in soil erosion and the discharge of sediments into the streams. A USGS study of water quality in the central Columbia plateau(USGS, 1998) found less suspended sediment and lower concentrations of DDT in streambed sediment and fish tissue in areas where sprinkler or drip irrigation predominated. "For nine drainage basins sampled in 1994, average daily yields of suspended sediment . . . . ranged from 0.4 pound per acre from a basin with no furrow irrigation to about 20 pounds per acre from a basin where about 60 percent of cropland is irrigated by the furrow method," the study states.(USGS, 1998)
Many agricultural practices in common use can dramatically reduce erosion, including the following.
(NACD)
Riparian buffers (also called filter strips)-Bands of vegetation along streams or other bodies of water, usually trees and grass. If they are wide enough, filter strips can filter sediment and other pollutants from runoff and allow some sediment to settle out. Filter strips also take up and store nutrients, control wind and dust, provide wildlife habitat and scenic beauty, prevent stream freezing and ice damage to banks, and prevent channel scouring. The Conservation Reserve Enhancement Program provides incentives to establish riparian buffers.
Contour farming-The practice of preparing land, planting crops, and cultivating them on a level or nearly level contour around a slope. Each crop row serves as a small dam to hold water on the slope. Compared to up-and-downhill farming, contour farming can cut soil losses by as much as 50 percent on long, gentle slopes.
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Contoured grassy buffer strip. 29 |
Crop rotation-Alternating a row crop with a cover crop such as hay or legumes gives the land a rest between row crops, improves the tilth of the soil, and protects it from erosion.
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Contour stripcropping- Combines the soil savings of contouring and crop rotations. Planting alternating contoured strips of row crops, small grains, and hay on a hillside can reduce soil losses up to 75 percent from those on hillsides farmed up and down with continuous row crops. The bands of hay or small grain slow runoff and trap sediment from row crop strips above them.
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Contoured rows. 30 |
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Field borders-A strip of perennial grass, legumes, or a mixture of the two established at the edge of a field. They can be used as turnstrips for machinery and eliminate the up-and-down-hill end rows that could cause soil erosion.
Terraces-Raised mounds of earth with flat tops and sloping sides, constructed across the slope of a cultivated hillside. Terraces reduce soil erosion by breaking long slopes into a series of shorter slopes. On shorter slopes, water doesn't build up as much speed and has less power to tear away soil particles.
Conservation tillage-Any tillage and planting system that leaves at least 30 percent of the ground after planting covered with the previous year's crop residues (no-till, ridge-till, or mulch-till). The disadvantage of this method is that it results in the use of more herbicides for weed control.
Grass waterways-A means to carry concentrated runoff water from hillsides without causing soil erosion. If natural watercourses in a field are continually cultivated, they become areas of bare, loose soil, vulnerable to erosion, where gullies form. If the watercourses are shaped and seeded to a grass cover, water flows over the grass without disturbing the soil, and cleaner water goes into the stream, lake, or reservoir.
Contour buffer strips-Strips of grass or legumes on a contoured field break up a long slope of row crops.
Water and sediment control basins-Where contours or terraces are impractical, short earthen embankments built across a drainageway help prevent erosion. These require frequent cleaning and maintenance.
Native tree and shrub plantings-Native vegetation on erodible steep hills, wet soils, or other suitable areas covers the ground, adds variety to the landscape, and is among the best sources of food and cover available to many species of wildlife.
The federal Conservation Reserve Program, started in 1986 and modified in 1990 and 1994, pays out between one and two billion dollars a year to make it financially attractive to protect wetlands, riparian areas, and highly erodible land. The farm owner, operator, or tenant agrees to retire environmentally sensitive cropland for 10 to 15 years, and in return receives annual payments plus half the cost of planting trees or other permanent vegetative cover. In 1996, the Federal Agriculture Improvement and Reform Act made it easier to sign up. Approximately 2.3 million acres in Idaho, Oregon, and Washington are enrolled in this program. (See descriptions of related programs in the Conservation Easement section.)
Reducing soil erosion and runoff, which carries sediment into the waterways, also helps to keep pesticides and herbicides out of surface water and groundwater. Most of these chemicals bind to soil particles; therefore, the less erosion, the less movement of the chemicals. It is also desirable to reduce synthetic chemical inputs.
A landmark study by the National Research Council reported that "alternative" agricultural methods could be as successful and profitable, for small or large farms, as "conventional" methods.(NRC, 1989) The difference is that alternative systems reduce synthetic chemical inputs (pesticides, fertilizers, and antibiotics), and "more deliberately integrate and take advantage of naturally occurring beneficial interactions" to raise healthy crops.
Alternative systems may require more information and more intensive management because it is necessary to balance and incorporate "natural processes such as nutrient cycles, nitrogen fixation, and pest-predator relationships into the agricultural production process. . . . The objective is to sustain and enhance rather than reduce and simplify the biological interactions on which production agriculture depends, thereby reducing the harmful off-farm effects of production practices."(NRC, 1989)
The study also found, however, that "Many federal policies discourage adoption of alternative practices." It recommended changes in policy as well as in research and extension programs to give farmers more incentives and more information. Recently, Congress has given more money to research in sustainable agriculture. Most extension programs now incorporate information on integrated pest management, conservation tillage, and many methods of reducing off-farm inputs.
Irrigation diversions, including ditches, canals, or intake pipes and pumps, can inadvertently divert juvenile fish onto the fields or into ditches that will periodically run dry. While screening these intake points can be expensive, in most areas there are public funds available for all or part of the cost.
Screen designs are site-specific. The design depends on the type of diversion, the amount of water flow, and the type and amount of debris commonly encountered. For example, rotary screens are drums that turn slowly at an angle to the flow; the fish are diverted into a pipe and sent back into the stream. Rotary screens often have a self-cleaning feature-the screen rotates or jets blow across it to clear debris.
Installing an infiltration gallery in the stream channel solves the problem in another way, and has the advantage of replacing diversions such as pushup dams that block fish passage. An infiltration gallery is a perforated intake pipe buried in the channel; there is no exposed diversion structure and water goes directly into the irrigation system through the pipe.
State departments of fish and wildlife and the NRCS provide information on screening diversions and sources of funding or partial funding. Federal funds for the Columbia Basin are available under the Mitchell Act screening program and the BPA fish and wildlife program.
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Pump-and-pipe irrigation withdrawl. 31 |