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The scientists at CRITFC are constantly working on new research to further our understanding of salmon and their habitat. Below are the published papers and technical reports that summarize this work.

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Recent Reports

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J indicates CRITFC employee.

15 March 2018

Utility of Pooled Sequencing for Association Mapping in Nonmodel Organisms

High‐density genome‐wide sequencing increases the likelihood of discovering genes of major effect and genomic structural variation in organisms. While there is an increasing availability of reference genomes across broad taxa, the greatest limitation to whole‐genome sequencing of multiple...

Steven Micheletti and Shawn Narum

30 June 2018

Upstream Migration Timing of Columbia Basin Chinook and Sockeye Salmon and Steelhead in 2016

Between April 15 and October 14, 2016, we sampled Sockeye (Oncorhynchus nerka) and Chinook (Oncorhynchus tshawytscha) salmon as well as steelhead (Oncorhynchus mykiss) at the Bonneville Dam Adult Fish Facility (AFF). Fish were measured for fork length, scales were...

Jeffrey Fryer, John Whiteaker, and Denise Kelsey

29 June 2018

Studies into Factors Limiting the Abundance of Okanagan and Wenatchee Sockeye Salmon in 2016 and 2017

A total of 1655 Sockeye Salmon, Oncorhynchus nerka, were sampled and PIT tagged at the Bonneville Dam Adult Fish Facility in 2016, while 1092 were PIT tagged in 2017. Sockeye PIT tagged by this project, along with previously PIT tagged Sockeye Salmon also sampled, were tracked upstream...

Jeffrey Fryer, Denise Kelsey, Howie Wright, Skyeler Folks, Richard Bussanich, Kim Hyatt, Dan Selbie, and Margot Stockwell

1 February 2018

The Sea Lamprey Germline Genome Provides Insights into Programmed Genome Rearrangement and Vertebrate Evolution

The sea lamprey (Petromyzon marinus) serves as a comparative model for reconstructing vertebrate evolution. To enable more informed analyses, we developed a new assembly of the lamprey germline genome that integrates several complementary data sets. Analysis of this highly contiguous...

Jeramiah Smith, Nataliya Timoshevskaya, Chengxi Ye, Carson Holt, Melissa Keinath, Hugo Parker, Malcolm Cook, Jon Hess, Shawn Narum, Francesco Lamanna, Henrik Kaessmann, Vladimir Timoshevskiy, Courtney Waterbury, Cody Saraceno, Leanne Wiedemann, Sofia Robb, Carl Baker, Evan Eichler, Dorit Hockman, Tatjana Sauka-Spengler, Mark Yandell, Robb Krumlauf, Greg Elgar, and Chris Amemiya

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